IL_7SUK_042

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GGAGA*UAUAC

Length

10 nucleotides

Bulged bases

7SUK|1|L0|A|102, 7SUK|1|L0|A|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SUK|1|L0|G|100
7SUK|1|L0|G|101
7SUK|1|L0|A|102
7SUK|1|L0|G|103
7SUK|1|L0|A|104
*
7SUK|1|L0|U|140
7SUK|1|L0|A|141
7SUK|1|L0|U|142
7SUK|1|L0|A|143
7SUK|1|L0|C|144

Current chains

Chain L0

5' ETS

Nearby chains

Chain LH

NET1-associated nuclear protein 1

Chain LJ

U3 small nucleolar RNA-associated protein 15

Chain LL

U3 small nucleolar RNA-associated protein 5