IL_7SUK_052
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- GAAU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SUK_052 not in the Motif Atlas
- Geometric match to IL_4V9F_068
- Geometric discrepancy: 0.3058
- The information below is about IL_4V9F_068
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_73108.2
- Basepair signature
- cWW-cWS-cSH-cWW
- Number of instances in this motif group
- 23
Unit IDs
7SUK|1|L0|G|337
7SUK|1|L0|A|338
7SUK|1|L0|A|339
7SUK|1|L0|U|340
*
7SUK|1|L0|A|386
7SUK|1|L0|C|387
Current chains
- Chain L0
- 5' ETS
Nearby chains
- Chain LW
- U3 small nucleolar RNA-associated protein 7
- Chain LZ
- U3 small nucleolar ribonucleoprotein protein IMP3
- Chain NE
- Protein FAF1
- Chain SS
- U3 small nucleolar RNA-associated protein 14
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