IL_7SUK_071

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GC*GUC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SUK_071 not in the Motif Atlas

Geometric match to IL_8VTW_057

Geometric discrepancy: 0.3353

The information below is about IL_8VTW_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

7SUK|1|8|G|1122
7SUK|1|8|C|1123
*
7SUK|1|L2|G|1
7SUK|1|L2|U|2
7SUK|1|L2|C|3

Current chains

Chain 8

18S pre-rRNA

Chain L2

U3 snoRNA

Nearby chains

Chain NE

Protein FAF1