IL_7SUK_082

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

AAUUGUCAG*CUUGGAUUUAUU

Length

21 nucleotides

Bulged bases

7SUK|1|8|U|894, 7SUK|1|8|G|895, 7SUK|1|8|U|896, 7SUK|1|8|C|897, 7SUK|1|8|G|913, 7SUK|1|8|G|914, 7SUK|1|8|A|919

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SUK|1|8|A|891
7SUK|1|8|A|892
7SUK|1|8|U|893
7SUK|1|8|U|894
7SUK|1|8|G|895
7SUK|1|8|U|896
7SUK|1|8|C|897
7SUK|1|8|A|898
7SUK|1|8|G|899
*
7SUK|1|8|C|910
7SUK|1|8|U|911
7SUK|1|8|U|912
7SUK|1|8|G|913
7SUK|1|8|G|914
7SUK|1|8|A|915
7SUK|1|8|U|916
7SUK|1|8|U|917
7SUK|1|8|U|918
7SUK|1|8|A|919
7SUK|1|8|U|920
7SUK|1|8|U|921

Current chains

Chain 8

18S pre-rRNA

Nearby chains

Chain LR

U3 small nucleolar RNA-associated protein 13

Chain NG

40S ribosomal protein S14-B