IL_7SYR_002
3D structure
- PDB id
- 7SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCU*AAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SYR_002 not in the Motif Atlas
- Geometric match to IL_4J50_001
- Geometric discrepancy: 0.1381
- The information below is about IL_4J50_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- Isolated cWH basepair
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
7SYR|1|2|U|34
7SYR|1|2|C|35
7SYR|1|2|U|36
*
7SYR|1|2|A|519
7SYR|1|2|A|520
7SYR|1|2|A|521
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain K
- uS4
Coloring options: