IL_7SYV_104
3D structure
- PDB id
- 7SYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 7SYV|1|2|U|1585, 7SYV|1|2|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SYV|1|2|G|1541
7SYV|1|2|C|1542
7SYV|1|2|U|1543
7SYV|1|2|C|1544
7SYV|1|2|A|1545
7SYV|1|2|G|1546
7SYV|1|2|C|1547
7SYV|1|2|G|1548
7SYV|1|2|U|1549
7SYV|1|2|G|1550
*
7SYV|1|2|C|1582
7SYV|1|2|C|1583
7SYV|1|2|G|1584
7SYV|1|2|U|1585
7SYV|1|2|U|1586
7SYV|1|2|G|1587
7SYV|1|2|A|1588
7SYV|1|2|A|1589
7SYV|1|2|C|1590
7SYV|1|2|C|1591
7SYV|1|2|C|1592
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain E
- uS3
- Chain G
- uS7
- Chain R
- uS9
- Chain U
- eS19
- Chain V
- uS10
- Chain a
- 40S ribosomal protein S25
- Chain e
- eS29
Coloring options: