IL_7TM3_022

3D structure

PDB id

7TM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7TM3|1|K|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TM3|1|K|A|466
7TM3|1|K|U|467
7TM3|1|K|U|468
7TM3|1|K|C|469
7TM3|1|K|A|470
7TM3|1|K|A|471
7TM3|1|K|C|472
*
7TM3|1|K|G|682
7TM3|1|K|C|683
7TM3|1|K|G|684
7TM3|1|K|C|685
7TM3|1|K|A|686
7TM3|1|K|U|687
7TM3|1|K|U|688
7TM3|1|K|U|689

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain r

eL28