IL_7TM3_105
3D structure
- PDB id
- 7TM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TM3_105 not in the Motif Atlas
- Homologous match to IL_8C3A_093
- Geometric discrepancy: 0.1489
- The information below is about IL_8C3A_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7TM3|1|K|U|3715
7TM3|1|K|C|3716
7TM3|1|K|A|3717
7TM3|1|K|A|3718
7TM3|1|K|A|3719
7TM3|1|K|G|3720
7TM3|1|K|U|3721
*
7TM3|1|K|A|3732
7TM3|1|K|A|3733
7TM3|1|K|U|3734
7TM3|1|K|G|3735
7TM3|1|K|A|3736
7TM3|1|K|A|3737
7TM3|1|K|G|3738
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain i
- 60S ribosomal protein L36
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