IL_7TOO_036
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGUAU*AAG
- Length
- 8 nucleotides
- Bulged bases
- 7TOO|1|A25S|A|1103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_036 not in the Motif Atlas
- Geometric match to IL_5TBW_036
- Geometric discrepancy: 0.232
- The information below is about IL_5TBW_036
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_42230.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7TOO|1|A25S|C|977
7TOO|1|A25S|G|978
7TOO|1|A25S|U|979
7TOO|1|A25S|A|980
7TOO|1|A25S|U|981
*
7TOO|1|A25S|A|1102
7TOO|1|A25S|A|1103
7TOO|1|A25S|G|1104
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL07
- 60S ribosomal protein L7-A
- Chain AL18
- 60S ribosomal protein L18-A
- Chain AL29
- RPL29 isoform 1
Coloring options: