IL_7TOO_071
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 7TOO|1|A25S|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_071 not in the Motif Atlas
- Homologous match to IL_8C3A_077
- Geometric discrepancy: 0.083
- The information below is about IL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7TOO|1|A25S|U|1694
7TOO|1|A25S|U|1695
7TOO|1|A25S|A|1696
7TOO|1|A25S|A|1697
7TOO|1|A25S|C|1698
*
7TOO|1|A25S|G|1747
7TOO|1|A25S|G|1748
7TOO|1|A25S|A|1749
7TOO|1|A25S|A|1750
7TOO|1|A25S|G|1751
7TOO|1|A25S|A|1752
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL34
- 60S ribosomal protein L34-A
- Chain AL38
- RPL38 isoform 1
Coloring options: