IL_7TOO_073
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 7TOO|1|A25S|U|1716, 7TOO|1|A25S|A|1729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_073 not in the Motif Atlas
- Homologous match to IL_8C3A_079
- Geometric discrepancy: 0.164
- The information below is about IL_8C3A_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7TOO|1|A25S|C|1711
7TOO|1|A25S|G|1712
7TOO|1|A25S|G|1713
7TOO|1|A25S|A|1714
7TOO|1|A25S|A|1715
7TOO|1|A25S|U|1716
7TOO|1|A25S|U|1717
*
7TOO|1|A25S|G|1727
7TOO|1|A25S|G|1728
7TOO|1|A25S|A|1729
7TOO|1|A25S|G|1730
7TOO|1|A25S|A|1731
7TOO|1|A25S|U|1732
7TOO|1|A25S|G|1733
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL19
- 60S ribosomal protein L19-A
- Chain AL27
- 60S ribosomal protein L27-A
- Chain AL30
- 60S ribosomal protein L30
- Chain AL43
- 60S ribosomal protein L43-A
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