IL_7TOQ_009

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUGGU*AACG

Length

10 nucleotides

Bulged bases

7TOQ|1|A18S|G|113

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A18S|U|110
7TOQ|1|A18S|A|111
7TOQ|1|A18S|U|112
7TOQ|1|A18S|G|113
7TOQ|1|A18S|G|114
7TOQ|1|A18S|U|115
*
7TOQ|1|A18S|A|348
7TOQ|1|A18S|A|349
7TOQ|1|A18S|C|350
7TOQ|1|A18S|G|351

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS04

40S ribosomal protein S4

Chain AS08

40S ribosomal protein S8

Chain AS11

40S ribosomal protein S11