IL_7TOQ_107
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUC*GCUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOQ_107 not in the Motif Atlas
- Geometric match to IL_4PHY_003
- Geometric discrepancy: 0.3885
- The information below is about IL_4PHY_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49140.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7TOQ|1|A25S|G|443
7TOQ|1|A25S|G|444
7TOQ|1|A25S|U|445
7TOQ|1|A25S|C|446
*
7TOQ|1|A25S|G|1300
7TOQ|1|A25S|C|1301
7TOQ|1|A25S|U|1302
7TOQ|1|A25S|A|1303
7TOQ|1|A25S|C|1304
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain A58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AL32
- 60S ribosomal protein L32
- Chain AL33
- 60S ribosomal protein L35a
Coloring options: