IL_7TOQ_121

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCC*GUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TOQ_121 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3727

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7TOQ|1|A25S|C|521
7TOQ|1|A25S|C|522
7TOQ|1|A25S|C|523
*
7TOQ|1|A25S|G|638
7TOQ|1|A25S|U|639
7TOQ|1|A25S|C|640
7TOQ|1|A25S|G|641

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL13

eL13