IL_7TOQ_135

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGG*CCGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|C|1357
7TOQ|1|A25S|G|1358
7TOQ|1|A25S|G|1359
7TOQ|1|A25S|G|1360
*
7TOQ|1|A25S|C|1378
7TOQ|1|A25S|C|1379
7TOQ|1|A25S|G|1380
7TOQ|1|A25S|U|1381
7TOQ|1|A25S|G|1382

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL13

eL13

Chain AL15

60S ribosomal protein L15

Chain AL28

60S ribosomal protein L27a