IL_7TOQ_242
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUCGGAUAGCC*GGUGCGGAGAG
- Length
- 23 nucleotides
- Bulged bases
- 7TOQ|1|A25S|C|4757, 7TOQ|1|A25S|U|4758, 7TOQ|1|A25S|U|4763, 7TOQ|1|A25S|A|4764, 7TOQ|1|A25S|G|4870, 7TOQ|1|A25S|C|4871, 7TOQ|1|A25S|G|4873, 7TOQ|1|A25S|A|4876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|4756
7TOQ|1|A25S|C|4757
7TOQ|1|A25S|U|4758
7TOQ|1|A25S|C|4759
7TOQ|1|A25S|G|4760
7TOQ|1|A25S|G|4761
7TOQ|1|A25S|A|4762
7TOQ|1|A25S|U|4763
7TOQ|1|A25S|A|4764
7TOQ|1|A25S|G|4765
7TOQ|1|A25S|C|4766
7TOQ|1|A25S|C|4767
*
7TOQ|1|A25S|G|4867
7TOQ|1|A25S|G|4868
7TOQ|1|A25S|U|4869
7TOQ|1|A25S|G|4870
7TOQ|1|A25S|C|4871
7TOQ|1|A25S|G|4872
7TOQ|1|A25S|G|4873
7TOQ|1|A25S|A|4874
7TOQ|1|A25S|G|4875
7TOQ|1|A25S|A|4876
7TOQ|1|A25S|G|4877
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL06
- 60S ribosomal protein L6
- Chain AL09
- 60S ribosomal protein L9
- Chain AL14
- 60S ribosomal protein L14
- Chain AL16
- uL13
- Chain AL20
- eL20
Coloring options: