IL_7TOQ_245

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

7TOQ|1|A25S|C|4895, 7TOQ|1|A25S|U|4925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|G|4890
7TOQ|1|A25S|G|4891
7TOQ|1|A25S|A|4892
7TOQ|1|A25S|A|4893
7TOQ|1|A25S|A|4894
7TOQ|1|A25S|C|4895
7TOQ|1|A25S|G|4896
*
7TOQ|1|A25S|C|4924
7TOQ|1|A25S|U|4925
7TOQ|1|A25S|C|4926
7TOQ|1|A25S|G|4927
7TOQ|1|A25S|C|4928
7TOQ|1|A25S|C|4929

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain AL14

60S ribosomal protein L14

Chain AL16

uL13