IL_7TOQ_270

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGUAUGG*CUGAAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A18S|G|1168
7TOQ|1|A18S|G|1169
7TOQ|1|A18S|A|1170
7TOQ|1|A18S|G|1171
7TOQ|1|A18S|U|1172
7TOQ|1|A18S|A|1173
7TOQ|1|A18S|U|1174
7TOQ|1|A18S|G|1175
7TOQ|1|A18S|G|1176
*
7TOQ|1|A18S|C|1185
7TOQ|1|A18S|U|1186
7TOQ|1|A18S|G|1187
7TOQ|1|A18S|A|1188
7TOQ|1|A18S|A|1189
7TOQ|1|A18S|A|1190
7TOQ|1|A18S|C|1191

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain A25S

Large subunit ribosomal RNA; LSU rRNA

Chain AL41

eL41

Chain AS23

40S ribosomal protein S23