IL_7TOQ_285

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TOQ_285 not in the Motif Atlas

Homologous match to IL_8P9A_275

Geometric discrepancy: 0.0941

The information below is about IL_8P9A_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|U|1861
7TOQ|1|A25S|U|1862
7TOQ|1|A25S|U|1863
*
7TOQ|1|A25S|A|1871
7TOQ|1|A25S|G|1872
7TOQ|1|A25S|A|1873

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain A5S

5S ribosomal RNA; 5S rRNA

Chain AL10

Ribosomal protein L10

Chain AL29

eL29