IL_7TOQ_286

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUAGACAGCA*UGCCGAA

Length

18 nucleotides

Bulged bases

7TOQ|1|A25S|A|1960

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|U|1957
7TOQ|1|A25S|A|1958
7TOQ|1|A25S|U|1959
7TOQ|1|A25S|A|1960
7TOQ|1|A25S|G|1961
7TOQ|1|A25S|A|1962
7TOQ|1|A25S|C|1963
7TOQ|1|A25S|A|1964
7TOQ|1|A25S|G|1965
7TOQ|1|A25S|C|1966
7TOQ|1|A25S|A|1967
*
7TOQ|1|A25S|U|2020
7TOQ|1|A25S|G|2021
7TOQ|1|A25S|C|2022
7TOQ|1|A25S|C|2023
7TOQ|1|A25S|G|2024
7TOQ|1|A25S|A|2025
7TOQ|1|A25S|A|2026

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL40

eL40

Chain ALP0

60S acidic ribosomal protein P0