IL_7TOQ_299

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

7TOQ|1|A25S|G|2903, 7TOQ|1|A25S|C|3593, 7TOQ|1|A25S|U|3595, 7TOQ|1|A25S|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|G|2901
7TOQ|1|A25S|G|2902
7TOQ|1|A25S|G|2903
7TOQ|1|A25S|U|2904
7TOQ|1|A25S|C|2905
*
7TOQ|1|A25S|G|3589
7TOQ|1|A25S|G|3590
7TOQ|1|A25S|C|3591
7TOQ|1|A25S|G|3592
7TOQ|1|A25S|C|3593
7TOQ|1|A25S|C|3594
7TOQ|1|A25S|U|3595
7TOQ|1|A25S|A|3596
7TOQ|1|A25S|G|3597
7TOQ|1|A25S|C|3598

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19