IL_7TOQ_300

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGACAUGA*UGAUCGUUUU

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|G|3944
7TOQ|1|A25S|A|3945
7TOQ|1|A25S|G|3946
7TOQ|1|A25S|A|3947
7TOQ|1|A25S|C|3948
7TOQ|1|A25S|A|3949
7TOQ|1|A25S|U|3950
7TOQ|1|A25S|G|3951
7TOQ|1|A25S|A|3952
*
7TOQ|1|A25S|U|4060
7TOQ|1|A25S|G|4061
7TOQ|1|A25S|A|4062
7TOQ|1|A25S|U|4063
7TOQ|1|A25S|C|4064
7TOQ|1|A25S|G|4065
7TOQ|1|A25S|U|4066
7TOQ|1|A25S|U|4067
7TOQ|1|A25S|U|4068
7TOQ|1|A25S|U|4069

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL36

60S ribosomal protein L36

Chain AS01

40S ribosomal protein S3a