IL_7TOR_007
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 7TOR|1|A18S|C|65, 7TOR|1|A18S|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_007 not in the Motif Atlas
- Geometric match to IL_4V88_390
- Geometric discrepancy: 0.2213
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7TOR|1|A18S|U|63
7TOR|1|A18S|A|64
7TOR|1|A18S|C|65
7TOR|1|A18S|G|66
7TOR|1|A18S|C|67
7TOR|1|A18S|A|68
*
7TOR|1|A18S|U|81
7TOR|1|A18S|G|82
7TOR|1|A18S|A|83
7TOR|1|A18S|A|84
7TOR|1|A18S|A|85
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS06
- 40S ribosomal protein S6
- Chain AS24
- 40S ribosomal protein S24
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