IL_7TOR_023
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAU*AAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_023 not in the Motif Atlas
- Geometric match to IL_3NJ7_004
- Geometric discrepancy: 0.1445
- The information below is about IL_3NJ7_004
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
7TOR|1|A18S|C|459
7TOR|1|A18S|A|460
7TOR|1|A18S|U|461
*
7TOR|1|A18S|A|468
7TOR|1|A18S|A|469
7TOR|1|A18S|G|470
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AL23
- 60S ribosomal protein L23
- Chain AS06
- 40S ribosomal protein S6
Coloring options: