IL_7TOR_147
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7TOR|1|A28S|G|1625, 7TOR|1|A28S|A|1637, 7TOR|1|A28S|A|1638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_147 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.069
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7TOR|1|A28S|G|1624
7TOR|1|A28S|G|1625
7TOR|1|A28S|G|1626
*
7TOR|1|A28S|U|1636
7TOR|1|A28S|A|1637
7TOR|1|A28S|A|1638
7TOR|1|A28S|U|1639
7TOR|1|A28S|C|1640
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL02
- 60S ribosomal protein L8
- Chain AL15
- 60S ribosomal protein L15
- Chain AL17
- 60S ribosomal protein L17
- Chain AL37
- 60S ribosomal protein L37
- Chain GR1
- GR20, ALS/FTD dipeptide repeat protein
Coloring options: