IL_7TOR_216
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_216 not in the Motif Atlas
- Homologous match to IL_8C3A_109
- Geometric discrepancy: 0.3056
- The information below is about IL_8C3A_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7TOR|1|A28S|U|4295
7TOR|1|A28S|U|4296
7TOR|1|A28S|G|4297
7TOR|1|A28S|A|4298
*
7TOR|1|A28S|U|4312
7TOR|1|A28S|A|4313
7TOR|1|A28S|C|4314
7TOR|1|A28S|A|4315
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL05
- 60S ribosomal protein L5
- Chain AL18
- eL18
- Chain AL21
- 60S ribosomal protein L21
- Chain AL29
- eL29
- Chain AL42
- eL42
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