IL_7TOR_285
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGCU*GAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_285 not in the Motif Atlas
- Homologous match to IL_8C3A_111
- Geometric discrepancy: 0.136
- The information below is about IL_8C3A_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7TOR|1|A28S|G|4400
7TOR|1|A28S|G|4401
7TOR|1|A28S|C|4402
7TOR|1|A28S|U|4403
*
7TOR|1|A28S|G|4440
7TOR|1|A28S|A|4441
7TOR|1|A28S|U|4442
7TOR|1|A28S|C|4443
7TOR|1|A28S|C|4444
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL03
- 60S ribosomal protein L3
- Chain AL10
- Ribosomal protein L10
- Chain AL29
- eL29
- Chain PTRN
- Transfer RNA; tRNA
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