IL_7TOR_287

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|C|4466
7TOR|1|A28S|A|4467
7TOR|1|A28S|U|4468
7TOR|1|A28S|U|4469
7TOR|1|A28S|G|4470
*
7TOR|1|A28S|C|4485
7TOR|1|A28S|C|4486
7TOR|1|A28S|A|4487
7TOR|1|A28S|A|4488
7TOR|1|A28S|G|4489
7TOR|1|A28S|C|4490
7TOR|1|A28S|G|4491

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL09

60S ribosomal protein L9

Chain AL23

60S ribosomal protein L23

Chain AL40

eL40