IL_7TOS_020
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_020 not in the Motif Atlas
- Homologous match to IL_5J7L_020
- Geometric discrepancy: 0.1183
- The information below is about IL_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7TOS|1|16S|U|409
7TOS|1|16S|G|410
7TOS|1|16S|A|411
7TOS|1|16S|A|412
7TOS|1|16S|G|413
7TOS|1|16S|A|414
7TOS|1|16S|A|415
7TOS|1|16S|G|416
*
7TOS|1|16S|U|427
7TOS|1|16S|G|428
7TOS|1|16S|U|429
7TOS|1|16S|A|430
7TOS|1|16S|A|431
7TOS|1|16S|A|432
7TOS|1|16S|G|433
Current chains
- Chain 16S
- 16S ribosomal RNA
Nearby chains
- Chain S04
- 30S ribosomal protein S4
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