IL_7TOS_069
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 7TOS|1|23S|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_069 not in the Motif Atlas
- Geometric match to IL_5J7L_248
- Geometric discrepancy: 0.2643
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7TOS|1|23S|G|81
7TOS|1|23S|U|82
7TOS|1|23S|A|83
7TOS|1|23S|A|84
7TOS|1|23S|G|85
*
7TOS|1|23S|C|97
7TOS|1|23S|G|98
7TOS|1|23S|U|99
7TOS|1|23S|U|100
7TOS|1|23S|A|101
7TOS|1|23S|U|102
7TOS|1|23S|A|103
7TOS|1|23S|A|104
7TOS|1|23S|C|105
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L24
- Ribosomal protein L24
- Chain L29
- 50S ribosomal protein L29
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