IL_7TOS_076
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 7TOS|1|23S|A|504, 7TOS|1|23S|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_076 not in the Motif Atlas
- Geometric match to IL_5J7L_255
- Geometric discrepancy: 0.0866
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
7TOS|1|23S|G|481
7TOS|1|23S|A|482
7TOS|1|23S|A|483
7TOS|1|23S|C|484
*
7TOS|1|23S|G|496
7TOS|1|23S|A|497
7TOS|1|23S|G|498
7TOS|1|23S|U|499
7TOS|1|23S|G|500
7TOS|1|23S|A|501
7TOS|1|23S|A|502
7TOS|1|23S|A|503
7TOS|1|23S|A|504
7TOS|1|23S|A|505
7TOS|1|23S|G|506
7TOS|1|23S|A|507
7TOS|1|23S|A|508
7TOS|1|23S|C|509
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L22
- 50S ribosomal protein L22
- Chain L24
- Ribosomal protein L24
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