IL_7TOS_115

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TOS_115 not in the Motif Atlas

Geometric match to IL_5J7L_294

Geometric discrepancy: 0.3377

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7TOS|1|23S|U|1415
7TOS|1|23S|G|1416
*
7TOS|1|23S|C|1582
7TOS|1|23S|A|1583
7TOS|1|23S|U|1584
7TOS|1|23S|C|1585
7TOS|1|23S|A|1586
7TOS|1|23S|G|1587

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains