IL_7TOS_149

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

7TOS|1|23S|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|23S|G|2124
7TOS|1|23S|G|2125
7TOS|1|23S|A|2126
7TOS|1|23S|G|2127
7TOS|1|23S|G|2128
*
7TOS|1|23S|C|2160
7TOS|1|23S|C|2161
7TOS|1|23S|G|2162
7TOS|1|23S|A|2163
7TOS|1|23S|C|2164
7TOS|1|23S|C|2165
7TOS|1|23S|U|2166
7TOS|1|23S|U|2167
7TOS|1|23S|G|2168
7TOS|1|23S|A|2169
7TOS|1|23S|A|2170
7TOS|1|23S|A|2171
7TOS|1|23S|U|2172
7TOS|1|23S|A|2173
7TOS|1|23S|C|2174

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L1