IL_7TOS_150

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUUUGAAGU*AUGGAGC

Length

17 nucleotides

Bulged bases

7TOS|1|23S|U|2132, 7TOS|1|23S|G|2133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|23S|G|2128
7TOS|1|23S|C|2129
7TOS|1|23S|U|2130
7TOS|1|23S|U|2131
7TOS|1|23S|U|2132
7TOS|1|23S|G|2133
7TOS|1|23S|A|2134
7TOS|1|23S|A|2135
7TOS|1|23S|G|2136
7TOS|1|23S|U|2137
*
7TOS|1|23S|A|2154
7TOS|1|23S|U|2155
7TOS|1|23S|G|2156
7TOS|1|23S|G|2157
7TOS|1|23S|A|2158
7TOS|1|23S|G|2159
7TOS|1|23S|C|2160

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L1