IL_7TOS_186
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_186 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1082
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
7TOS|1|23S|G|1666
7TOS|1|23S|G|1667
7TOS|1|23S|A|1668
7TOS|1|23S|A|1669
7TOS|1|23S|C|1670
7TOS|1|23S|U|1671
7TOS|1|23S|A|1672
7TOS|1|23S|G|1673
7TOS|1|23S|G|1674
*
7TOS|1|23S|C|1990
7TOS|1|23S|U|1991
7TOS|1|23S|G|1992
7TOS|1|23S|U|1993
7TOS|1|23S|C|1994
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L03
- 50S ribosomal protein L3
- Chain L14
- 50S ribosomal protein L14
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