IL_7TOS_188

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAUGUGUAGGAUAGGUGG*CCACCCUUUA

Length

29 nucleotides

Bulged bases

7TOS|1|23S|U|2111, 7TOS|1|23S|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|23S|U|2106
7TOS|1|23S|G|2107
7TOS|1|23S|A|2108
7TOS|1|23S|U|2109
7TOS|1|23S|G|2110
7TOS|1|23S|U|2111
7TOS|1|23S|G|2112
7TOS|1|23S|U|2113
7TOS|1|23S|A|2114
7TOS|1|23S|G|2115
7TOS|1|23S|G|2116
7TOS|1|23S|A|2117
7TOS|1|23S|U|2118
7TOS|1|23S|A|2119
7TOS|1|23S|G|2120
7TOS|1|23S|G|2121
7TOS|1|23S|U|2122
7TOS|1|23S|G|2123
7TOS|1|23S|G|2124
*
7TOS|1|23S|C|2174
7TOS|1|23S|C|2175
7TOS|1|23S|A|2176
7TOS|1|23S|C|2177
7TOS|1|23S|C|2178
7TOS|1|23S|C|2179
7TOS|1|23S|U|2180
7TOS|1|23S|U|2181
7TOS|1|23S|U|2182
7TOS|1|23S|A|2183

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L1