IL_7TQL_076
3D structure
- PDB id
- 7TQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- ACU*AUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TQL_076 not in the Motif Atlas
- Geometric match to IL_4P3T_001
- Geometric discrepancy: 0.087
- The information below is about IL_4P3T_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
7TQL|1|2|A|1537
7TQL|1|2|C|1538
7TQL|1|2|U|1539
*
7TQL|1|2|A|1594
7TQL|1|2|U|1595
7TQL|1|2|U|1596
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain K
- 40S ribosomal protein S5
- Chain T
- ribosomal protein uS13
- Chain U
- 40S ribosomal protein S19
- Chain a
- ribosomal protein eS25
Coloring options: