IL_7TQL_085
3D structure
- PDB id
- 7TQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TQL_085 not in the Motif Atlas
- Homologous match to IL_4V88_468
- Geometric discrepancy: 0.1864
- The information below is about IL_4V88_468
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7TQL|1|2|C|1717
7TQL|1|2|G|1718
7TQL|1|2|A|1719
7TQL|1|2|U|1720
*
7TQL|1|2|A|1813
7TQL|1|2|G|1814
7TQL|1|2|A|1815
7TQL|1|2|G|1816
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Eukaryotic translation initiation factor 5B
- Chain X
- 40S ribosomal protein S23
- Chain h
- ribosomal protein eL41
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