IL_7TTU_046

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_046 not in the Motif Atlas

Geometric match to IL_4WF9_054

Geometric discrepancy: 0.2036

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7TTU|1|1|C|1461
7TTU|1|1|G|1462
7TTU|1|1|A|1463
7TTU|1|1|U|1464
7TTU|1|1|G|1465
*
7TTU|1|1|C|1624
7TTU|1|1|U|1625
7TTU|1|1|A|1626
7TTU|1|1|G|1627

Current chains

Chain 1

23S rRNA

Nearby chains