3D structure

PDB id
7TTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AGC*GAUU
Length
7 nucleotides
Bulged bases
7TTU|1|1|A|2008
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7TTU_056 not in the Motif Atlas
Geometric match to IL_4WF9_083
Geometric discrepancy: 0.2193
The information below is about IL_4WF9_083
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_87907.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
179

Unit IDs

7TTU|1|1|A|1796
7TTU|1|1|G|1797
7TTU|1|1|C|1798
*
7TTU|1|1|G|2007
7TTU|1|1|A|2008
7TTU|1|1|U|2009
7TTU|1|1|U|2010

Current chains

Chain 1
23S rRNA

Nearby chains

Chain B
50S ribosomal protein L2

Coloring options:


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