IL_7TTU_067

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACGG*CCUAU

Length

9 nucleotides

Bulged bases

7TTU|1|1|C|2082, 7TTU|1|1|U|2640, 7TTU|1|1|A|2641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_067 not in the Motif Atlas

Geometric match to IL_7RQB_079

Geometric discrepancy: 0.2272

The information below is about IL_7RQB_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01206.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7TTU|1|1|A|2081
7TTU|1|1|C|2082
7TTU|1|1|G|2083
7TTU|1|1|G|2084
*
7TTU|1|1|C|2638
7TTU|1|1|C|2639
7TTU|1|1|U|2640
7TTU|1|1|A|2641
7TTU|1|1|U|2642

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L22

Chain L

50S ribosomal protein L3

Chain N

50S ribosomal protein L32