IL_7TTU_069

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7TTU|1|1|A|2466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_069 not in the Motif Atlas

Geometric match to IL_7RQB_081

Geometric discrepancy: 0.1233

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

7TTU|1|1|G|2097
7TTU|1|1|A|2098
*
7TTU|1|1|U|2465
7TTU|1|1|A|2466
7TTU|1|1|C|2467
7TTU|1|1|C|2468

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2