IL_7TTU_085
3D structure
- PDB id
- 7TTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 7TTU|1|1|G|2807
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TTU_085 not in the Motif Atlas
- Geometric match to IL_4WF9_099
- Geometric discrepancy: 0.0946
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7TTU|1|1|U|2663
7TTU|1|1|U|2664
7TTU|1|1|G|2665
7TTU|1|1|A|2666
7TTU|1|1|G|2667
*
7TTU|1|1|C|2801
7TTU|1|1|A|2802
7TTU|1|1|A|2803
7TTU|1|1|G|2804
7TTU|1|1|A|2805
7TTU|1|1|U|2806
7TTU|1|1|G|2807
7TTU|1|1|A|2808
7TTU|1|1|G|2809
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain V
- 50S ribosomal protein L13
Coloring options: