IL_7TTW_043

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAAG*CGC

Length

8 nucleotides

Bulged bases

7TTW|1|1|G|1369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTW_043 not in the Motif Atlas

Geometric match to IL_4WF9_050

Geometric discrepancy: 0.1601

The information below is about IL_4WF9_050

Detailed Annotation

Major groove minor groove platform with tHH

Broad Annotation

No text annotation

Motif group

IL_06671.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

11

Unit IDs

7TTW|1|1|G|1356
7TTW|1|1|G|1357
7TTW|1|1|A|1358
7TTW|1|1|A|1359
7TTW|1|1|G|1360
*
7TTW|1|1|C|1368
7TTW|1|1|G|1369
7TTW|1|1|C|1370

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L22