IL_7TTW_061

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGCUAAA*UGAUGUAUA

Length

16 nucleotides

Bulged bases

7TTW|1|1|U|1828, 7TTW|1|1|U|1843, 7TTW|1|1|U|1847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTW_061 not in the Motif Atlas

Geometric match to IL_7RQB_070

Geometric discrepancy: 0.1144

The information below is about IL_7RQB_070

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_17069.3

Basepair signature

cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW

Number of instances in this motif group

5

Unit IDs

7TTW|1|1|U|1825
7TTW|1|1|G|1826
7TTW|1|1|C|1827
7TTW|1|1|U|1828
7TTW|1|1|A|1829
7TTW|1|1|A|1830
7TTW|1|1|A|1831
*
7TTW|1|1|U|1840
7TTW|1|1|G|1841
7TTW|1|1|A|1842
7TTW|1|1|U|1843
7TTW|1|1|G|1844
7TTW|1|1|U|1845
7TTW|1|1|A|1846
7TTW|1|1|U|1847
7TTW|1|1|A|1848

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2