IL_7TTW_062

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCGG*CG

Length

6 nucleotides

Bulged bases

7TTW|1|1|C|1865

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTW_062 not in the Motif Atlas

Geometric match to IL_5TBW_084

Geometric discrepancy: 0.3015

The information below is about IL_5TBW_084

Detailed Annotation

Major groove intercalation

Broad Annotation

No text annotation

Motif group

IL_88739.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7TTW|1|1|C|1864
7TTW|1|1|C|1865
7TTW|1|1|G|1866
7TTW|1|1|G|1867
*
7TTW|1|1|C|1929
7TTW|1|1|G|1930

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2