IL_7U0H_060
3D structure
- PDB id
- 7U0H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UGAAU*AGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7U0H_060 not in the Motif Atlas
- Geometric match to IL_7RQB_075
- Geometric discrepancy: 0.1399
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
7U0H|1|1|U|1645
7U0H|1|1|G|1646
7U0H|1|1|A|1647
7U0H|1|1|A|1648
7U0H|1|1|U|1649
*
7U0H|1|1|A|1806
7U0H|1|1|G|1807
7U0H|1|1|G|1808
7U0H|1|1|A|1809
7U0H|1|1|A|1810
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
- Chain n
- Pescadillo homolog
- Chain q
- Ribosome biogenesis protein NOP53
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