IL_7U0H_070
3D structure
- PDB id
- 7U0H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 7U0H|1|1|G|2335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7U0H_070 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.1435
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
7U0H|1|1|A|1901
7U0H|1|1|G|1902
7U0H|1|1|U|1903
7U0H|1|1|C|1904
7U0H|1|1|G|1905
7U0H|1|1|G|1906
*
7U0H|1|1|C|2333
7U0H|1|1|U|2334
7U0H|1|1|G|2335
7U0H|1|1|U|2336
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain V
- 60S ribosomal protein L23-A
Coloring options: