IL_7U0H_101

3D structure

PDB id

7U0H (explore in PDB, NAKB, or RNA 3D Hub)

Description

State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U0H_101 not in the Motif Atlas

Geometric match to IL_6MWN_005

Geometric discrepancy: 0.1011

The information below is about IL_6MWN_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

7U0H|1|1|C|3235
7U0H|1|1|U|3236
7U0H|1|1|U|3237
7U0H|1|1|G|3238
*
7U0H|1|1|C|3249
7U0H|1|1|U|3250
7U0H|1|1|U|3251
7U0H|1|1|G|3252

Current chains

Chain 1

25S rRNA

Nearby chains

Chain O

60S ribosomal protein L16-A