IL_7U2I_352

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGAAUC*GAUAG

Length

11 nucleotides

Bulged bases

7U2I|1|2A|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U2I_352 not in the Motif Atlas

Geometric match to IL_2QWY_007

Geometric discrepancy: 0.3732

The information below is about IL_2QWY_007

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7U2I|1|2A|C|280
7U2I|1|2A|G|281
7U2I|1|2A|A|282
7U2I|1|2A|A|283
7U2I|1|2A|U|284
7U2I|1|2A|C|285
*
7U2I|1|2A|G|356
7U2I|1|2A|A|357
7U2I|1|2A|U|358
7U2I|1|2A|A|359
7U2I|1|2A|G|360

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains